The SDK jemalloc is built against might be not be the latest for various
reasons, but the resulting binary ought to work on newer versions of
OSX.
In order to ensure this, we need the fullest definitions possible, so
copy what we need from the latest version of malloc/malloc.h available
on opensource.apple.com.
Mostly revert the prof_realloc() changes in
498856f44a (Move slabs out of chunks.) so
that prof_free_sampled_object() is called when appropriate. Leave the
prof_tctx_[re]set() optimization in place, but add an assertion to
verify that all eight cases are correctly handled. Add a comment to
make clear the code ordering, so that the regression originally fixed by
ea8d97b897 (Fix
prof_{malloc,free}_sample_object() call order in prof_realloc().) is not
repeated.
This resolves#499.
This is part of a broader change to make header files better represent the
dependencies between one another (see
https://github.com/jemalloc/jemalloc/issues/533). It breaks up component headers
into smaller parts that can be made to have a simpler dependency graph.
For the autogenerated headers (smoothstep.h and size_classes.h), no splitting
was necessary, so I didn't add support to emit multiple headers.
Currently, jemalloc detects sparc64 targets by checking whether
__sparc64__ is defined. However, this definition is used on BSD
targets only. Linux targets define both __sparc__ and __arch64__
for sparc64. Since this also works on BSD, rather use __sparc__
and __arch64__ instead of __sparc64__ to detect sparc64 targets.
Refactor ctl_stats_t to be a demand-zeroed non-growing data structure.
To keep the size from being onerous (~60 MiB) on 32-bit systems, convert
the arenas field to contain pointers rather than directly embedded
ctl_arena_stats_t elements.
Add the MALLCTL_ARENAS_ALL cpp macro as a fixed index for use
in accessing the arena.<i>.{purge,decay,dss} and stats.arenas.<i>.*
mallctls, and deprecate access via the arenas.narenas index (to be
removed in 6.0.0).
Add/rename related mallctls:
- Add stats.arenas.<i>.base .
- Rename stats.arenas.<i>.metadata to stats.arenas.<i>.internal .
- Add stats.arenas.<i>.resident .
Modify the arenas.extend mallctl to take an optional (extent_hooks_t *)
argument so that it is possible for all base allocations to be serviced
by the specified extent hooks.
This resolves#463.
Split purging into lazy and forced variants. Use the forced variant for
zeroing dss.
Add support for NULL function pointers as an opt-out mechanism for the
dalloc, commit, decommit, purge_lazy, purge_forced, split, and merge
fields of extent_hooks_t.
Add short-circuiting checks in large_ralloc_no_move_{shrink,expand}() so
that no attempt is made if splitting/merging is not supported.
This resolves#268.
If virtual memory is retained, allocate extents such that their sizes
form an exponentially growing series. This limits the number of
disjoint virtual memory ranges so that extent merging can be effective
even if multiple arenas' extent allocation requests are highly
interleaved.
This resolves#462.
Add the --with-lg-hugepage configure option, but automatically configure
LG_HUGEPAGE even if it isn't specified.
Add the pages_[no]huge() functions, which toggle huge page state via
madvise(..., MADV_[NO]HUGEPAGE) calls.
Rewrite arena_slab_regind() to provide sufficient constant data for
the compiler to perform division strength reduction. This replaces
more general manual strength reduction that was implemented before
arena_bin_info was compile-time-constant. It would be possible to
slightly improve on the compiler-generated division code by taking
advantage of range limits that the compiler doesn't know about.
Adds cpp bindings for jemalloc, along with necessary autoconf settings.
This is mostly to add sized deallocation support, which can't be added
from C directly. Sized deallocation is ~10% microbench improvement.
* Import ax_cxx_compile_stdcxx.m4 from the autoconf repo, seems like the
easiest way to get c++14 detection.
* Adds various other changes, like CXXFLAGS, to configure.ac.
* Adds new rules to Makefile.in for src/jemalloc-cpp.cpp, and a basic
unittest.
* Both new and delete are overridden, to ensure jemalloc is used for
both.
* TODO future enhancement of avoiding extra PLT thunks for new and
delete - sdallocx and malloc are publicly exported jemalloc symbols,
using an alias would link them directly. Unfortunately, was having
trouble getting it to play nice with jemalloc's namespace support.
Testing:
Tested gcc 4.8, gcc 5, gcc 5.2, clang 4.0. Only gcc >= 5 has sized
deallocation support, verified that the rest build correctly.
Tested mac osx and Centos.
Tested --with-jemalloc-prefix and --without-export.
This resolves#202.
Some versions of Android provide a pthreads library without providing
pthread_atfork(), so in practice a separate feature test is necessary
for the latter.
Add feature tests for the MADV_FREE and MADV_DONTNEED flags to
madvise(2), so that MADV_FREE is detected and used for Linux kernel
versions 4.5 and newer. Refactor pages_purge() so that on systems which
support both flags, MADV_FREE is preferred over MADV_DONTNEED.
This resolves#387.
Add extent serial numbers and use them where appropriate as a sort key
that is higher priority than address, so that the allocation policy
prefers older extents.
This resolves#147.
Add an "over-size" extent heap in which to store extents which exceed
the maximum size class (plus cache-oblivious padding, if enabled).
Remove psz2ind_clamp() and use psz2ind() instead so that trying to
allocate the maximum size class can in principle succeed. In practice,
this allows assertions to hold so that OOM errors can be successfully
generated.
Fix extent_alloc_cache[_locked]() to support decommitted allocation, and
use this ability in arena_stash_dirty(), so that decommitted extents are
not needlessly committed during purging. In practice this does not
happen on any currently supported systems, because both extent merging
and decommit must be implemented; all supported systems implement one
xor the other.
rtree_node_init spinlocks the node, allocates, and then sets the node.
This is under heavy contention at the top of the tree if many threads
start to allocate at the same time.
Instead, take a per-rtree sleeping mutex to reduce spinning. Tested
both pthreads and osx OSSpinLock, and both reduce spinning adequately
Previous benchmark time:
./ttest1 500 100
~15s
New benchmark time:
./ttest1 500 100
.57s
Fix zone_force_unlock() to reinitialize, rather than unlocking mutexes,
since OS X 10.12 cannot tolerate a child unlocking mutexes that were
locked by its parent.
Refactor; this was a side effect of experimenting with zone
{de,re}registration during fork(2).
The raw clock variant is slow (even relative to plain CLOCK_MONOTONIC),
whereas the coarse clock variant is faster than CLOCK_MONOTONIC, but
still has resolution (~1ms) that is adequate for our purposes.
This resolves#479.
glibc defines its malloc implementation with several weak and strong
symbols:
strong_alias (__libc_calloc, __calloc) weak_alias (__libc_calloc, calloc)
strong_alias (__libc_free, __cfree) weak_alias (__libc_free, cfree)
strong_alias (__libc_free, __free) strong_alias (__libc_free, free)
strong_alias (__libc_malloc, __malloc) strong_alias (__libc_malloc, malloc)
The issue is not with the weak symbols, but that other parts of glibc
depend on __libc_malloc explicitly. Defining them in terms of jemalloc
API's allows the linker to drop glibc's malloc.o completely from the link,
and static linking no longer results in symbol collisions.
Another wrinkle: jemalloc during initialization calls sysconf to
get the number of CPU's. GLIBC allocates for the first time before
setting up isspace (and other related) tables, which are used by
sysconf. Instead, use the pthread API to get the number of
CPUs with GLIBC, which seems to work.
This resolves#442.
Rather than relying on two's complement negation for alignment mask
generation, use bitwise not and addition. This dodges warnings from
MSVC, and should be strength-reduced by compiler optimization anyway.
Rather than protecting dss operations with a mutex, use atomic
operations. This has negligible impact on synchronization overhead
during typical dss allocation, but is a substantial improvement for
extent_in_dss() and the newly added extent_dss_mergeable(), which can be
called multiple times during extent deallocations.
This change also has the advantage of avoiding tsd in deallocation paths
associated with purging, which resolves potential deadlocks during
thread exit due to attempted tsd resurrection.
This resolves#425.
Add spin_t and spin_{init,adaptive}(), which provide a simple
abstraction for adaptive spinning.
Adaptively spin during busy waits in bootstrapping and rtree node
initialization.
Simplify decay-based purging attempts to only be triggered when the
epoch is advanced, rather than every time purgeable memory increases.
In a correctly functioning system (not previously the case; see below),
this only causes a behavior difference if during subsequent purge
attempts the least recently used (LRU) purgeable memory extent is
initially too large to be purged, but that memory is reused between
attempts and one or more of the next LRU purgeable memory extents are
small enough to be purged. In practice this is an arbitrary behavior
change that is within the set of acceptable behaviors.
As for the purging fix, assure that arena->decay.ndirty is recorded
*after* the epoch advance and associated purging occurs. Prior to this
fix, it was possible for purging during epoch advance to cause a
substantially underrepresentative (arena->ndirty - arena->decay.ndirty),
i.e. the number of dirty pages attributed to the current epoch was too
low, and a series of unintended purges could result. This fix is also
relevant in the context of the simplification described above, but the
bug's impact would be limited to over-purging at epoch advances.
Instead, move the epoch backward in time. Additionally, add
nstime_monotonic() and use it in debug builds to assert that time only
goes backward if nstime_update() is using a non-monotonic time source.
Add missing #include <time.h>. The critical time facilities appear to
have been transitively included via unistd.h and sys/time.h, but in
principle this omission was capable of having caused
clock_gettime(CLOCK_MONOTONIC, ...) to have been overlooked in favor of
gettimeofday(), which in turn could cause spurious non-monotonic time
updates.
Refactor nstime_get() out of nstime_update() and add configure tests for
all variants.
Add CLOCK_MONOTONIC_RAW support (Linux-specific) and
mach_absolute_time() support (OS X-specific).
Do not fall back to clock_gettime(CLOCK_REALTIME, ...). This was a
fragile Linux-specific workaround, which we're unlikely to use at all
now that clock_gettime(CLOCK_MONOTONIC_RAW, ...) is supported, and if we
have no choice besides non-monotonic clocks, gettimeofday() is only
incrementally worse.
Avoid calling s2u() on raw extent sizes in extent_recycle().
Clamp psz2ind() (implemented as psz2ind_clamp()) when inserting/removing
into/from size-segregated extent heaps.
GCC 4.9.3 cross-compiled for sparc64 defines __sparc_v9__, not
__sparc64__ nor __sparcv9. This prevents LG_QUANTUM from being defined
properly. Adding this new value to the check solves the issue.
Add a configure check for __builtin_unreachable instead of basing its
availability on the __GNUC__ version. On OS X using gcc (a real gcc, not the
bundled version that's just a gcc front-end) leads to a linker assertion:
https://github.com/jemalloc/jemalloc/issues/266
It turns out that this is caused by a gcc bug resulting from the use of
__builtin_unreachable():
https://gcc.gnu.org/bugzilla/show_bug.cgi?id=57438
To work around this bug, check that __builtin_unreachable() actually works at
configure time, and if it doesn't use abort() instead. The check is based on
https://gcc.gnu.org/bugzilla/show_bug.cgi?id=57438#c21.
With this `make check` passes with a homebrew installed gcc-5 and gcc-6.
Some bug (either in the red-black tree code, or in the pgi compiler) seems to
cause red-black trees to become unbalanced. This issue seems to go away if we
don't use compact red-black trees. Since red-black trees don't seem to be used
much anymore, I opted for what seems to be an easy fix here instead of digging
in and trying to find the root cause of the bug.
Some context in case it's helpful:
I experienced a ton of segfaults while using pgi as Chapel's target compiler
with jemalloc 4.0.4. The little bit of debugging I did pointed me somewhere
deep in red-black tree manipulation, but I didn't get a chance to investigate
further. It looks like 4.2.0 replaced most uses of red-black trees with
pairing-heaps, which seems to avoid whatever bug I was hitting.
However, `make check_unit` was still failing on the rb test, so I figured the
core issue was just being masked. Here's the `make check_unit` failure:
```sh
=== test/unit/rb ===
test_rb_empty: pass
tree_recurse:test/unit/rb.c:90: Failed assertion: (((_Bool) (((uintptr_t) (left_node)->link.rbn_right_red) & ((size_t)1)))) == (false) --> true != false: Node should be black
test_rb_random:test/unit/rb.c:274: Failed assertion: (imbalances) == (0) --> 1 != 0: Tree is unbalanced
tree_recurse:test/unit/rb.c:90: Failed assertion: (((_Bool) (((uintptr_t) (left_node)->link.rbn_right_red) & ((size_t)1)))) == (false) --> true != false: Node should be black
test_rb_random:test/unit/rb.c:274: Failed assertion: (imbalances) == (0) --> 1 != 0: Tree is unbalanced
node_remove:test/unit/rb.c:190: Failed assertion: (imbalances) == (0) --> 2 != 0: Tree is unbalanced
<jemalloc>: test/unit/rb.c:43: Failed assertion: "pathp[-1].cmp < 0"
test/test.sh: line 22: 12926 Aborted
Test harness error
```
While starting to debug I saw the RB_COMPACT option and decided to check if
turning that off resolved the bug. It seems to have fixed it (`make check_unit`
passes and the segfaults under Chapel are gone) so it seems like on okay
work-around. I'd imagine this has performance implications for red-black trees
under pgi, but if they're not going to be used much anymore it's probably not a
big deal.
Revert 245ae6036c (Support --with-lg-page
values larger than actual page size.), because it could cause VM map
fragmentation if the kernel grows mmap()ed memory downward.
This resolves#391.
rtree-based extent lookups remain more expensive than chunk-based run
lookups, but with this optimization the fast path slowdown is ~3 CPU
cycles per metadata lookup (on Intel Core i7-4980HQ), versus ~11 cycles
prior. The path caching speedup tends to degrade gracefully unless
allocated memory is spread far apart (as is the case when using a
mixture of sbrk() and mmap()).
In the case where prof_alloc_prep() is called with an over-estimate of
allocation size, and sampling doesn't end up being triggered, the tctx
must be discarded.
When an allocation is large enough to trigger multiple dumps, use
modular math rather than subtraction to reset the interval counter.
Prior to this change, it was possible for a single allocation to cause
many subsequent allocations to all trigger profile dumps.
When updating usable size for a sampled object, try to cancel out
the difference between LARGE_MINCLASS and usable size from the interval
counter.
Look up chunk metadata via the radix tree, rather than using
CHUNK_ADDR2BASE().
Propagate pointer's containing extent.
Minimize extent lookups by doing a single lookup (e.g. in free()) and
propagating the pointer's extent into nearly all the functions that may
need it.
This makes it possible to acquire short-term "ownership" of rtree
elements so that it is possible to read an extent pointer *and* read the
extent's contents with a guarantee that the element will not be modified
until the ownership is released. This is intended as a mechanism for
resolving rtree read/write races rather than as a way to lock extents.
Use pszind_t size classes rather than szind_t size classes, and always
reserve space for NPSIZES elements. This removes unused heaps that are
not multiples of the page size, and adds (currently) unused heaps for
all huge size classes, with the immediate benefit that the size of
arena_t allocations is constant (no longer dependent on chunk size).
These compute size classes and indices similarly to size2index(),
index2size() and s2u(), respectively, but using the subset of size
classes that are multiples of the page size. Note that pszind_t and
szind_t are not interchangeable.
Short-circuit commonly called witness functions so that they only
execute in debug builds, and remove equivalent guards from mutex
functions. This avoids pointless code execution in
witness_assert_lockless(), which is typically called twice per
allocation/deallocation function invocation.
Inline commonly called witness functions so that optimized builds can
completely remove calls as dead code.
b2c0d6322d (Add witness, a simple online
locking validator.) caused a broad propagation of tsd throughout the
internal API, but tsd_fetch() was designed to fail prior to tsd
bootstrapping. Fix this by splitting tsd_t into non-nullable tsd_t and
nullable tsdn_t, and modifying all internal APIs that do not critically
rely on tsd to take nullable pointers. Furthermore, add the
tsd_booted_get() function so that tsdn_fetch() can probe whether tsd
bootstrapping is complete and return NULL if not. All dangerous
conversions of nullable pointers are tsdn_tsd() calls that assert-fail
on invalid conversion.
This is a broader application of optimizations to malloc() and free() in
f4a0f32d34 (Fast-path improvement:
reduce # of branches and unnecessary operations.).
This resolves#321.
If the OS overcommits:
- Commit all mappings in pages_map() regardless of whether the caller
requested committed memory.
- Linux-specific: Specify MAP_NORESERVE to avoid
unfortunate interactions with heuristic overcommit mode during
fork(2).
This resolves#193.
Split arena_choose() into arena_[i]choose() and use arena_ichoose() for
arena lookup during internal allocation. This fixes huge_palloc() so
that it always succeeds during extent node allocation.
This regression was introduced by
66cd953514 (Do not allocate metadata via
non-auto arenas, nor tcaches.).
Change test-related mangling to simplify symbol filtering.
The following commands can be used to detect missing/obsolete symbol
mangling, with the caveat that the full set of symbols is based on the
union of symbols generated by all configurations, some of which are
platform-specific:
./autogen.sh --enable-debug --enable-prof --enable-lazy-lock
make all tests
nm -a lib/libjemalloc.a src/*.jet.o \
|grep " [TDBCR] " \
|awk '{print $3}' \
|sed -e 's/^\(je_\|jet_\(n_\)\?\)\([a-zA-Z0-9_]*\)/\3/g' \
|LC_COLLATE=C sort -u \
|grep -v \
-e '^\(malloc\|calloc\|posix_memalign\|aligned_alloc\|realloc\|free\)$' \
-e '^\(m\|r\|x\|s\|d\|sd\|n\)allocx$' \
-e '^mallctl\(\|nametomib\|bymib\)$' \
-e '^malloc_\(stats_print\|usable_size\|message\)$' \
-e '^\(memalign\|valloc\)$' \
-e '^__\(malloc\|memalign\|realloc\|free\)_hook$' \
-e '^pthread_create$' \
> /tmp/private_symbols.txt
Fix a compilation error that occurs if Valgrind is not enabled. This
regression was caused by b2c0d6322d (Add
witness, a simple online locking validator.).
During over-allocation in preparation for creating aligned mappings,
allocate one more page than necessary if PAGE is the actual page size,
so that trimming still succeeds even if the system returns a mapping
that has less than PAGE alignment. This allows compiling with e.g. 64
KiB "pages" on systems that actually use 4 KiB pages.
Note that for e.g. --with-lg-page=21, it is also necessary to increase
the chunk size (e.g. --with-malloc-conf=lg_chunk:22) so that there are
at least two "pages" per chunk. In practice this isn't a particularly
compelling configuration because so much (unusable) virtual memory is
dedicated to chunk headers.
Refactor ph to support configurable comparison functions. Use a cpp
macro code generation form equivalent to the rb macros so that pairing
heaps can be used for both run heaps and chunk heaps.
Remove per node parent pointers, and instead use leftmost siblings' prev
pointers to track parents.
Fix multi-pass sibling merging to iterate over intermediate results
using a FIFO, rather than a LIFO. Use this fixed sibling merging
implementation for both merge phases of the auxiliary twopass algorithm
(first merging the aux list, then replacing the root with its merged
children). This fixes both degenerate merge behavior and the potential
for deep recursion.
This regression was introduced by
6bafa6678f (Pairing heap).
This resolves#371.
Fix bitmap_sfu() to shift by LG_BITMAP_GROUP_NBITS rather than
hard-coded 6 when using linear (non-USE_TREE) bitmap search. In
practice this affects only 64-bit systems for which sizeof(long) is not
8 (i.e. Windows), since USE_TREE is defined for 32-bit systems.
This regression was caused by b8823ab026
(Use linear scan for small bitmaps).
This resolves#368.
