Cray systems come with compiler wrappers to simplify building parallel
applications. CC is the C++ wrapper, and cc is the C wrapper.
The wrappers call the base {Cray, Intel, PGI, or GNU} compiler with vendor
specific flags. The "Programming Environment" (prgenv) that's currently loaded
determines the base compiler. e.g. compiling with gnu looks something like:
module load PrgEnv-gnu
cc hello.c
On most systems the wrappers defaults to `-static` mode, which causes them to
only look for static libraries, and not for any dynamic ones (even if the
dynamic version was explicitly listed.)
The integration and stress tests expect to be using the .so, so we have to run
the with -dynamic so that wrapper will find/use the .so.
Some bug (either in the red-black tree code, or in the pgi compiler) seems to
cause red-black trees to become unbalanced. This issue seems to go away if we
don't use compact red-black trees. Since red-black trees don't seem to be used
much anymore, I opted for what seems to be an easy fix here instead of digging
in and trying to find the root cause of the bug.
Some context in case it's helpful:
I experienced a ton of segfaults while using pgi as Chapel's target compiler
with jemalloc 4.0.4. The little bit of debugging I did pointed me somewhere
deep in red-black tree manipulation, but I didn't get a chance to investigate
further. It looks like 4.2.0 replaced most uses of red-black trees with
pairing-heaps, which seems to avoid whatever bug I was hitting.
However, `make check_unit` was still failing on the rb test, so I figured the
core issue was just being masked. Here's the `make check_unit` failure:
```sh
=== test/unit/rb ===
test_rb_empty: pass
tree_recurse:test/unit/rb.c:90: Failed assertion: (((_Bool) (((uintptr_t) (left_node)->link.rbn_right_red) & ((size_t)1)))) == (false) --> true != false: Node should be black
test_rb_random:test/unit/rb.c:274: Failed assertion: (imbalances) == (0) --> 1 != 0: Tree is unbalanced
tree_recurse:test/unit/rb.c:90: Failed assertion: (((_Bool) (((uintptr_t) (left_node)->link.rbn_right_red) & ((size_t)1)))) == (false) --> true != false: Node should be black
test_rb_random:test/unit/rb.c:274: Failed assertion: (imbalances) == (0) --> 1 != 0: Tree is unbalanced
node_remove:test/unit/rb.c:190: Failed assertion: (imbalances) == (0) --> 2 != 0: Tree is unbalanced
<jemalloc>: test/unit/rb.c:43: Failed assertion: "pathp[-1].cmp < 0"
test/test.sh: line 22: 12926 Aborted
Test harness error
```
While starting to debug I saw the RB_COMPACT option and decided to check if
turning that off resolved the bug. It seems to have fixed it (`make check_unit`
passes and the segfaults under Chapel are gone) so it seems like on okay
work-around. I'd imagine this has performance implications for red-black trees
under pgi, but if they're not going to be used much anymore it's probably not a
big deal.
pgi fails to compile math.c, reporting that `-INFINITY` in `pt_norm_expected[]`
is a "Non-constant" expression. A simplified version of this failure is:
```c
#include <math.h>
static double inf1, inf2 = INFINITY; // no complaints
static double inf3 = INFINITY; // suddenly INFINITY is "Non-constant"
int main() { }
```
```sh
PGC-S-0074-Non-constant expression in initializer (t.c: 4)
```
pgi errors on the declaration of inf3, and will compile fine if that line is
removed. I've reported this bug to pgi, but in the meantime I just switched to
using (DBL_MAX + DBL_MAX) to work around this bug.
On OSX 10.12, malloc_default_zone returns a special zone that is not
present in the list of registered zones. That zone uses a "lite zone"
if one is present (apparently enabled when malloc stack logging is
enabled), or the first registered zone otherwise. In practice this
means unless malloc stack logging is enabled, the first registered
zone is the default.
So get the list of zones to get the first one, instead of relying on
malloc_default_zone.
In 1167e9e, I accidentally tested je_cv_gcc_builtin_ffsl instead of
je_cv_gcc_builtin_unreachable (copy-paste error), which meant that
JEMALLOC_INTERNAL_UNREACHABLE was always getting defined as abort even if
__builtin_unreachable support was detected.
Add a configure check for __builtin_unreachable instead of basing its
availability on the __GNUC__ version. On OS X using gcc (a real gcc, not the
bundled version that's just a gcc front-end) leads to a linker assertion:
https://github.com/jemalloc/jemalloc/issues/266
It turns out that this is caused by a gcc bug resulting from the use of
__builtin_unreachable():
https://gcc.gnu.org/bugzilla/show_bug.cgi?id=57438
To work around this bug, check that __builtin_unreachable() actually works at
configure time, and if it doesn't use abort() instead. The check is based on
https://gcc.gnu.org/bugzilla/show_bug.cgi?id=57438#c21.
With this `make check` passes with a homebrew installed gcc-5 and gcc-6.
This works around GitHub's broken automatic reformatting from ISO-8859-1
to UTF-8 when serving static html.
Remove <parameter/> from e.g. <function>malloc<parameter/></function>,
add a custom template that does not append parentheses, and manually
specify them, e.g. <function>malloc()</function>. This works around
apparently broken XSL formatting that causes <code/> to be emitted in
html (rather than <code></code>, or better yet, nothing).
rallocx() for an alignment-constrained request may end up with a
smaller-than-worst-case size if in-place reallocation succeeds due to
serendipitous alignment. In such cases, sampling may not happen.
In the case where prof_alloc_prep() is called with an over-estimate of
allocation size, and sampling doesn't end up being triggered, the tctx
must be discarded.
Fix huge_ralloc_no_move_expand() to update the extent's zeroed attribute
based on the intersection of the previous value and that of the newly
merged trailing extent.
Revert 245ae6036c (Support --with-lg-page
values larger than actual page size.), because it could cause VM map
fragmentation if the kernel grows mmap()ed memory downward.
This resolves#391.
Short-circuit commonly called witness functions so that they only
execute in debug builds, and remove equivalent guards from mutex
functions. This avoids pointless code execution in
witness_assert_lockless(), which is typically called twice per
allocation/deallocation function invocation.
Inline commonly called witness functions so that optimized builds can
completely remove calls as dead code.
b2c0d6322d (Add witness, a simple online
locking validator.) caused a broad propagation of tsd throughout the
internal API, but tsd_fetch() was designed to fail prior to tsd
bootstrapping. Fix this by splitting tsd_t into non-nullable tsd_t and
nullable tsdn_t, and modifying all internal APIs that do not critically
rely on tsd to take nullable pointers. Furthermore, add the
tsd_booted_get() function so that tsdn_fetch() can probe whether tsd
bootstrapping is complete and return NULL if not. All dangerous
conversions of nullable pointers are tsdn_tsd() calls that assert-fail
on invalid conversion.
This is a broader application of optimizations to malloc() and free() in
f4a0f32d34 (Fast-path improvement:
reduce # of branches and unnecessary operations.).
This resolves#321.
If the OS overcommits:
- Commit all mappings in pages_map() regardless of whether the caller
requested committed memory.
- Linux-specific: Specify MAP_NORESERVE to avoid
unfortunate interactions with heuristic overcommit mode during
fork(2).
This resolves#193.
Depending on virtual memory resource limits, it is necessary to attempt
allocating three maximally sized objects to trigger OOM rather than just
two, since the maximum supported size is slightly less than half the
total virtual memory address space.
This fixes a test failure that was introduced by
0c516a00c4 (Make *allocx() size class
overflow behavior defined.).
This resolves#379.
Split arena_choose() into arena_[i]choose() and use arena_ichoose() for
arena lookup during internal allocation. This fixes huge_palloc() so
that it always succeeds during extent node allocation.
This regression was introduced by
66cd953514 (Do not allocate metadata via
non-auto arenas, nor tcaches.).
