The Cray compiler wrappers will often add `-lrt` to the base compiler with
`-static` linking (the default at most sites.) However, `-lrt` isn't
automatically added with `-dynamic`. This means that if jemalloc was built with
`-static`, but then used in a program with `-dynamic` jemalloc won't have
detected that librt is a dependency.
The integration and stress tests use -dynamic, which is causing undefined
references to clock_gettime().
This just adds an extra check for librt (ignoring the autoconf cache) with
`-dynamic` thrown. It also stops filtering librt from the integration tests.
With this `make check` passes for:
- PrgEnv-gnu
- PrgEnv-intel
- PrgEnv-pgi
PrgEnv-cray still needs more work (will be in a separate patch.)
Cray systems come with compiler wrappers to simplify building parallel
applications. CC is the C++ wrapper, and cc is the C wrapper.
The wrappers call the base {Cray, Intel, PGI, or GNU} compiler with vendor
specific flags. The "Programming Environment" (prgenv) that's currently loaded
determines the base compiler. e.g. compiling with gnu looks something like:
module load PrgEnv-gnu
cc hello.c
On most systems the wrappers defaults to `-static` mode, which causes them to
only look for static libraries, and not for any dynamic ones (even if the
dynamic version was explicitly listed.)
The integration and stress tests expect to be using the .so, so we have to run
the with -dynamic so that wrapper will find/use the .so.
This builds jemalloc and runs all checks with:
- MSVC 2015 64-bits
- MSVC 2015 32-bits
- MINGW64 (from msys2)
- MINGW32 (from msys2)
Normally, AppVeyor configs are named appveyor.yml, but it is possible to
configure the .yml file name in the AppVeyor project settings such that
the file stays "hidden", like typical travis configs.
Some bug (either in the red-black tree code, or in the pgi compiler) seems to
cause red-black trees to become unbalanced. This issue seems to go away if we
don't use compact red-black trees. Since red-black trees don't seem to be used
much anymore, I opted for what seems to be an easy fix here instead of digging
in and trying to find the root cause of the bug.
Some context in case it's helpful:
I experienced a ton of segfaults while using pgi as Chapel's target compiler
with jemalloc 4.0.4. The little bit of debugging I did pointed me somewhere
deep in red-black tree manipulation, but I didn't get a chance to investigate
further. It looks like 4.2.0 replaced most uses of red-black trees with
pairing-heaps, which seems to avoid whatever bug I was hitting.
However, `make check_unit` was still failing on the rb test, so I figured the
core issue was just being masked. Here's the `make check_unit` failure:
```sh
=== test/unit/rb ===
test_rb_empty: pass
tree_recurse:test/unit/rb.c:90: Failed assertion: (((_Bool) (((uintptr_t) (left_node)->link.rbn_right_red) & ((size_t)1)))) == (false) --> true != false: Node should be black
test_rb_random:test/unit/rb.c:274: Failed assertion: (imbalances) == (0) --> 1 != 0: Tree is unbalanced
tree_recurse:test/unit/rb.c:90: Failed assertion: (((_Bool) (((uintptr_t) (left_node)->link.rbn_right_red) & ((size_t)1)))) == (false) --> true != false: Node should be black
test_rb_random:test/unit/rb.c:274: Failed assertion: (imbalances) == (0) --> 1 != 0: Tree is unbalanced
node_remove:test/unit/rb.c:190: Failed assertion: (imbalances) == (0) --> 2 != 0: Tree is unbalanced
<jemalloc>: test/unit/rb.c:43: Failed assertion: "pathp[-1].cmp < 0"
test/test.sh: line 22: 12926 Aborted
Test harness error
```
While starting to debug I saw the RB_COMPACT option and decided to check if
turning that off resolved the bug. It seems to have fixed it (`make check_unit`
passes and the segfaults under Chapel are gone) so it seems like on okay
work-around. I'd imagine this has performance implications for red-black trees
under pgi, but if they're not going to be used much anymore it's probably not a
big deal.
pgi fails to compile math.c, reporting that `-INFINITY` in `pt_norm_expected[]`
is a "Non-constant" expression. A simplified version of this failure is:
```c
#include <math.h>
static double inf1, inf2 = INFINITY; // no complaints
static double inf3 = INFINITY; // suddenly INFINITY is "Non-constant"
int main() { }
```
```sh
PGC-S-0074-Non-constant expression in initializer (t.c: 4)
```
pgi errors on the declaration of inf3, and will compile fine if that line is
removed. I've reported this bug to pgi, but in the meantime I just switched to
using (DBL_MAX + DBL_MAX) to work around this bug.
Revert 245ae6036c (Support --with-lg-page
values larger than actual page size.), because it could cause VM map
fragmentation if the kernel grows mmap()ed memory downward.
This resolves#391.
Fix a fundamental extent_split_wrapper() bug in an error path.
Fix extent_recycle() to deregister unsplittable extents before leaking
them.
Relax xallocx() test assertions so that unsplittable extents don't cause
test failures.
With the removal of subchunk size class infrastructure, there are no
large size classes that are guaranteed to be re-expandable in place
unless munmap() is disabled. Work around these legitimate failures with
rallocx() fallback calls. If there were no test configuration for which
the xallocx() calls succeeded, it would be important to override the
extent hooks for testing purposes, but by default these tests don't use
the rallocx() fallbacks on Linux, so test coverage is still sufficient.
rtree-based extent lookups remain more expensive than chunk-based run
lookups, but with this optimization the fast path slowdown is ~3 CPU
cycles per metadata lookup (on Intel Core i7-4980HQ), versus ~11 cycles
prior. The path caching speedup tends to degrade gracefully unless
allocated memory is spread far apart (as is the case when using a
mixture of sbrk() and mmap()).
rallocx() for an alignment-constrained request may end up with a
smaller-than-worst-case size if in-place reallocation succeeds due to
serendipitous alignment. In such cases, sampling may not happen.
In the case where prof_alloc_prep() is called with an over-estimate of
allocation size, and sampling doesn't end up being triggered, the tctx
must be discarded.
When an allocation is large enough to trigger multiple dumps, use
modular math rather than subtraction to reset the interval counter.
Prior to this change, it was possible for a single allocation to cause
many subsequent allocations to all trigger profile dumps.
When updating usable size for a sampled object, try to cancel out
the difference between LARGE_MINCLASS and usable size from the interval
counter.
