The new feature, opt.percpu_arena, determines thread-arena association
dynamically based CPU id. Three modes are supported: "percpu", "phycpu"
and disabled.
"percpu" uses the current core id (with help from sched_getcpu())
directly as the arena index, while "phycpu" will assign threads on the
same physical CPU to the same arena. In other words, "percpu" means # of
arenas == # of CPUs, while "phycpu" has # of arenas == 1/2 * (# of
CPUs). Note that no runtime check on whether hyper threading is enabled
is added yet.
When enabled, threads will be migrated between arenas when a CPU change
is detected. In the current design, to reduce overhead from reading CPU
id, each arena tracks the thread accessed most recently. When a new
thread comes in, we will read CPU id and update arena if necessary.
When witness is enabled, lock rank order needs to be preserved during
prefork, not only for each arena, but also across arenas. This change
breaks arena_prefork into further stages to ensure valid rank order
across arenas. Also changed test/unit/fork to use a manual arena to
catch this case.
In the process, we can do some strength reduction, changing the fetch-adds and
fetch-subs to be simple loads followed by stores, since the modifications all
occur while holding the mutex.
The C11 atomics backport removed this #define, which degraded atomic 64-bit
reads to require a lock even on platforms that support them. This commit fixes
that.
This fixes tcache_flush for manual tcaches, which wasn't able to find
the correct arena it associated with. Also changed the decay test to
cover this case (by using manually created arenas).
These functions select the easiest-to-remove element in the heap, which
is either the most recently inserted aux list element or the root. If
no calls are made to first() or remove_first(), the behavior (and time
complexity) is the same as for a LIFO queue.
Rather than purging uncoalesced extents, perform just enough incremental
coalescing to purge only fully coalesced extents. In the absence of
cached extent reuse, the immediate versus delayed incremental purging
algorithms result in the same purge order.
This resolves#655.
In the C11 atomics backport, we couldn't use not_reached() in
atomic_enum_to_builtin (in atomic_gcc_atomic.h), since atomic.h was hermetic and
assert.h wasn't; there was a dependency issue. assert.h is hermetic now, so we
can include it.
This is the first header refactoring diff, #533. It splits the assert and util
components into separate, hermetic, header files. In the process, it splits out
two of the large sub-components of util (the stdio.h replacement, and bit
manipulation routines) into their own components (malloc_io.h and bit_util.h).
This is mostly to break up cyclic dependencies, but it also breaks off a good
chunk of the catch-all-ness of util, which is nice.
Convert the nrequests field to be partially derived, and the curlextents
to be fully derived, in order to reduce the number of stats updates
needed during common operations.
This change affects ndalloc stats during arena reset, because it is no
longer possible to cancel out ndalloc effects (curlextents would become
negative).
This introduces a backport of C11 atomics. It has four implementations; ranked
in order of preference, they are:
- GCC/Clang __atomic builtins
- GCC/Clang __sync builtins
- MSVC _Interlocked builtins
- C11 atomics, from <stdatomic.h>
The primary advantages are:
- Close adherence to the standard API gives us a defined memory model.
- Type safety: atomic objects are now separate types from non-atomic ones, so
that it's impossible to mix up atomic and non-atomic updates (which is
undefined behavior that compilers are starting to take advantage of).
- Efficiency: we can specify ordering for operations, avoiding fences and
atomic operations on strongly ordered architectures (example:
`atomic_write_u32(ptr, val);` involves a CAS loop, whereas
`atomic_store(ptr, val, ATOMIC_RELEASE);` is a plain store.
This diff leaves in the current atomics API (implementing them in terms of the
backport). This lets us transition uses over piecemeal.
Testing:
This is by nature hard to test. I've manually tested the first three options on
Linux on gcc by futzing with the #defines manually, on freebsd with gcc and
clang, on MSVC, and on OS X with clang. All of these were x86 machines though,
and we don't have any test infrastructure set up for non-x86 platforms.
In the long term, we'll transition to C99-style inline semantics. In the
short-term, this will allow both styles to coexist without breaking one another.
Remove obsolete unit test scaffolding for extent quantization. Remove
redundant assertions. Add an assertion to
extents_first_best_fit_locked() that should help prevent aligned
allocation regressions.
We don't touch witness at all when config_debug == false. Let's only pay the
memory cost in malloc_mutex_s when needed. Note that when !config_debug, we keep
the field in a union so that we don't have to do #ifdefs in multiple places.
Extent splitting and coalescing is a major component of large allocation
overhead, and disabling coalescing of cached extents provides a simple
and effective hysteresis mechanism. Once two-phase purging is
implemented, it will probably make sense to leave coalescing disabled
for the first phase, but coalesce during the second phase.
This avoids a gcc diagnostic note:
note: The ABI for passing parameters with 64-byte alignment has
changed in GCC 4.6
This note related to the cacheline alignment of rtree_ctx_t, which was
introduced by 4a346f5593 (Replace rtree
path cache with LRU cache.).
Fix rtree_subkey() to use uintptr_t rather than unsigned for key
bitmasking. This regression was introduced by
4a346f5593 (Replace rtree path cache with
LRU cache.).
Rather than dynamically building a table to aid per level computations,
define a constant table at compile time. Omit both high and low
insignificant bits. Use one to three tree levels, depending on the
number of significant bits.
Rework rtree_ctx_t to encapsulate an rtree leaf LRU lookup cache rather
than a single-path element lookup cache. The replacement is logically
much simpler, as well as slightly faster in the fast path case and less
prone to degraded performance during non-trivial sequences of lookups.
Refactor arena and extent locking protocols such that arena and
extent locks are never held when calling into the extent_*_wrapper()
API. This requires extra care during purging since the arena lock no
longer protects the inner purging logic. It also requires extra care to
protect extents from being merged with adjacent extents.
Convert extent_t's 'active' flag to an enumerated 'state', so that
retained extents are explicitly marked as such, rather than depending on
ring linkage state.
Refactor the extent collections (and their synchronization) for cached
and retained extents into extents_t. Incorporate LRU functionality to
support purging. Incorporate page count accounting, which replaces
arena->ndirty and arena->stats.retained.
Assert that no core locks are held when entering any internal
[de]allocation functions. This is in addition to existing assertions
that no locks are held when entering external [de]allocation functions.
Audit and document synchronization protocols for all arena_t fields.
This fixes a potential deadlock due to recursive allocation during
gdump, in a similar fashion to b49c649bc1
(Fix lock order reversal during gdump.), but with a necessarily much
broader code impact.
Synchronize tcaches with tcaches_mtx rather than ctl_mtx. Add missing
synchronization for tcache flushing. This bug was introduced by
1cb181ed63 (Implement explicit tcache
support.), which was first released in 4.0.0.
The SDK jemalloc is built against might be not be the latest for various
reasons, but the resulting binary ought to work on newer versions of
OSX.
In order to ensure this, we need the fullest definitions possible, so
copy what we need from the latest version of malloc/malloc.h available
on opensource.apple.com.
Mostly revert the prof_realloc() changes in
498856f44a (Move slabs out of chunks.) so
that prof_free_sampled_object() is called when appropriate. Leave the
prof_tctx_[re]set() optimization in place, but add an assertion to
verify that all eight cases are correctly handled. Add a comment to
make clear the code ordering, so that the regression originally fixed by
ea8d97b897 (Fix
prof_{malloc,free}_sample_object() call order in prof_realloc().) is not
repeated.
This resolves#499.
This is part of a broader change to make header files better represent the
dependencies between one another (see
https://github.com/jemalloc/jemalloc/issues/533). It breaks up component headers
into smaller parts that can be made to have a simpler dependency graph.
For the autogenerated headers (smoothstep.h and size_classes.h), no splitting
was necessary, so I didn't add support to emit multiple headers.
Currently, jemalloc detects sparc64 targets by checking whether
__sparc64__ is defined. However, this definition is used on BSD
targets only. Linux targets define both __sparc__ and __arch64__
for sparc64. Since this also works on BSD, rather use __sparc__
and __arch64__ instead of __sparc64__ to detect sparc64 targets.
Refactor ctl_stats_t to be a demand-zeroed non-growing data structure.
To keep the size from being onerous (~60 MiB) on 32-bit systems, convert
the arenas field to contain pointers rather than directly embedded
ctl_arena_stats_t elements.
Add the MALLCTL_ARENAS_ALL cpp macro as a fixed index for use
in accessing the arena.<i>.{purge,decay,dss} and stats.arenas.<i>.*
mallctls, and deprecate access via the arenas.narenas index (to be
removed in 6.0.0).
Add/rename related mallctls:
- Add stats.arenas.<i>.base .
- Rename stats.arenas.<i>.metadata to stats.arenas.<i>.internal .
- Add stats.arenas.<i>.resident .
Modify the arenas.extend mallctl to take an optional (extent_hooks_t *)
argument so that it is possible for all base allocations to be serviced
by the specified extent hooks.
This resolves#463.
Split purging into lazy and forced variants. Use the forced variant for
zeroing dss.
Add support for NULL function pointers as an opt-out mechanism for the
dalloc, commit, decommit, purge_lazy, purge_forced, split, and merge
fields of extent_hooks_t.
Add short-circuiting checks in large_ralloc_no_move_{shrink,expand}() so
that no attempt is made if splitting/merging is not supported.
This resolves#268.
If virtual memory is retained, allocate extents such that their sizes
form an exponentially growing series. This limits the number of
disjoint virtual memory ranges so that extent merging can be effective
even if multiple arenas' extent allocation requests are highly
interleaved.
This resolves#462.
Add the --with-lg-hugepage configure option, but automatically configure
LG_HUGEPAGE even if it isn't specified.
Add the pages_[no]huge() functions, which toggle huge page state via
madvise(..., MADV_[NO]HUGEPAGE) calls.
Rewrite arena_slab_regind() to provide sufficient constant data for
the compiler to perform division strength reduction. This replaces
more general manual strength reduction that was implemented before
arena_bin_info was compile-time-constant. It would be possible to
slightly improve on the compiler-generated division code by taking
advantage of range limits that the compiler doesn't know about.
Adds cpp bindings for jemalloc, along with necessary autoconf settings.
This is mostly to add sized deallocation support, which can't be added
from C directly. Sized deallocation is ~10% microbench improvement.
* Import ax_cxx_compile_stdcxx.m4 from the autoconf repo, seems like the
easiest way to get c++14 detection.
* Adds various other changes, like CXXFLAGS, to configure.ac.
* Adds new rules to Makefile.in for src/jemalloc-cpp.cpp, and a basic
unittest.
* Both new and delete are overridden, to ensure jemalloc is used for
both.
* TODO future enhancement of avoiding extra PLT thunks for new and
delete - sdallocx and malloc are publicly exported jemalloc symbols,
using an alias would link them directly. Unfortunately, was having
trouble getting it to play nice with jemalloc's namespace support.
Testing:
Tested gcc 4.8, gcc 5, gcc 5.2, clang 4.0. Only gcc >= 5 has sized
deallocation support, verified that the rest build correctly.
Tested mac osx and Centos.
Tested --with-jemalloc-prefix and --without-export.
This resolves#202.
Some versions of Android provide a pthreads library without providing
pthread_atfork(), so in practice a separate feature test is necessary
for the latter.
Add feature tests for the MADV_FREE and MADV_DONTNEED flags to
madvise(2), so that MADV_FREE is detected and used for Linux kernel
versions 4.5 and newer. Refactor pages_purge() so that on systems which
support both flags, MADV_FREE is preferred over MADV_DONTNEED.
This resolves#387.
Add extent serial numbers and use them where appropriate as a sort key
that is higher priority than address, so that the allocation policy
prefers older extents.
This resolves#147.
Add an "over-size" extent heap in which to store extents which exceed
the maximum size class (plus cache-oblivious padding, if enabled).
Remove psz2ind_clamp() and use psz2ind() instead so that trying to
allocate the maximum size class can in principle succeed. In practice,
this allows assertions to hold so that OOM errors can be successfully
generated.
Fix extent_alloc_cache[_locked]() to support decommitted allocation, and
use this ability in arena_stash_dirty(), so that decommitted extents are
not needlessly committed during purging. In practice this does not
happen on any currently supported systems, because both extent merging
and decommit must be implemented; all supported systems implement one
xor the other.
rtree_node_init spinlocks the node, allocates, and then sets the node.
This is under heavy contention at the top of the tree if many threads
start to allocate at the same time.
Instead, take a per-rtree sleeping mutex to reduce spinning. Tested
both pthreads and osx OSSpinLock, and both reduce spinning adequately
Previous benchmark time:
./ttest1 500 100
~15s
New benchmark time:
./ttest1 500 100
.57s
Fix zone_force_unlock() to reinitialize, rather than unlocking mutexes,
since OS X 10.12 cannot tolerate a child unlocking mutexes that were
locked by its parent.
Refactor; this was a side effect of experimenting with zone
{de,re}registration during fork(2).
The raw clock variant is slow (even relative to plain CLOCK_MONOTONIC),
whereas the coarse clock variant is faster than CLOCK_MONOTONIC, but
still has resolution (~1ms) that is adequate for our purposes.
This resolves#479.
glibc defines its malloc implementation with several weak and strong
symbols:
strong_alias (__libc_calloc, __calloc) weak_alias (__libc_calloc, calloc)
strong_alias (__libc_free, __cfree) weak_alias (__libc_free, cfree)
strong_alias (__libc_free, __free) strong_alias (__libc_free, free)
strong_alias (__libc_malloc, __malloc) strong_alias (__libc_malloc, malloc)
The issue is not with the weak symbols, but that other parts of glibc
depend on __libc_malloc explicitly. Defining them in terms of jemalloc
API's allows the linker to drop glibc's malloc.o completely from the link,
and static linking no longer results in symbol collisions.
Another wrinkle: jemalloc during initialization calls sysconf to
get the number of CPU's. GLIBC allocates for the first time before
setting up isspace (and other related) tables, which are used by
sysconf. Instead, use the pthread API to get the number of
CPUs with GLIBC, which seems to work.
This resolves#442.
Rather than relying on two's complement negation for alignment mask
generation, use bitwise not and addition. This dodges warnings from
MSVC, and should be strength-reduced by compiler optimization anyway.
Rather than protecting dss operations with a mutex, use atomic
operations. This has negligible impact on synchronization overhead
during typical dss allocation, but is a substantial improvement for
extent_in_dss() and the newly added extent_dss_mergeable(), which can be
called multiple times during extent deallocations.
This change also has the advantage of avoiding tsd in deallocation paths
associated with purging, which resolves potential deadlocks during
thread exit due to attempted tsd resurrection.
This resolves#425.
Add spin_t and spin_{init,adaptive}(), which provide a simple
abstraction for adaptive spinning.
Adaptively spin during busy waits in bootstrapping and rtree node
initialization.
Simplify decay-based purging attempts to only be triggered when the
epoch is advanced, rather than every time purgeable memory increases.
In a correctly functioning system (not previously the case; see below),
this only causes a behavior difference if during subsequent purge
attempts the least recently used (LRU) purgeable memory extent is
initially too large to be purged, but that memory is reused between
attempts and one or more of the next LRU purgeable memory extents are
small enough to be purged. In practice this is an arbitrary behavior
change that is within the set of acceptable behaviors.
As for the purging fix, assure that arena->decay.ndirty is recorded
*after* the epoch advance and associated purging occurs. Prior to this
fix, it was possible for purging during epoch advance to cause a
substantially underrepresentative (arena->ndirty - arena->decay.ndirty),
i.e. the number of dirty pages attributed to the current epoch was too
low, and a series of unintended purges could result. This fix is also
relevant in the context of the simplification described above, but the
bug's impact would be limited to over-purging at epoch advances.
Instead, move the epoch backward in time. Additionally, add
nstime_monotonic() and use it in debug builds to assert that time only
goes backward if nstime_update() is using a non-monotonic time source.
Add missing #include <time.h>. The critical time facilities appear to
have been transitively included via unistd.h and sys/time.h, but in
principle this omission was capable of having caused
clock_gettime(CLOCK_MONOTONIC, ...) to have been overlooked in favor of
gettimeofday(), which in turn could cause spurious non-monotonic time
updates.
Refactor nstime_get() out of nstime_update() and add configure tests for
all variants.
Add CLOCK_MONOTONIC_RAW support (Linux-specific) and
mach_absolute_time() support (OS X-specific).
Do not fall back to clock_gettime(CLOCK_REALTIME, ...). This was a
fragile Linux-specific workaround, which we're unlikely to use at all
now that clock_gettime(CLOCK_MONOTONIC_RAW, ...) is supported, and if we
have no choice besides non-monotonic clocks, gettimeofday() is only
incrementally worse.
Avoid calling s2u() on raw extent sizes in extent_recycle().
Clamp psz2ind() (implemented as psz2ind_clamp()) when inserting/removing
into/from size-segregated extent heaps.
GCC 4.9.3 cross-compiled for sparc64 defines __sparc_v9__, not
__sparc64__ nor __sparcv9. This prevents LG_QUANTUM from being defined
properly. Adding this new value to the check solves the issue.
Add a configure check for __builtin_unreachable instead of basing its
availability on the __GNUC__ version. On OS X using gcc (a real gcc, not the
bundled version that's just a gcc front-end) leads to a linker assertion:
https://github.com/jemalloc/jemalloc/issues/266
It turns out that this is caused by a gcc bug resulting from the use of
__builtin_unreachable():
https://gcc.gnu.org/bugzilla/show_bug.cgi?id=57438
To work around this bug, check that __builtin_unreachable() actually works at
configure time, and if it doesn't use abort() instead. The check is based on
https://gcc.gnu.org/bugzilla/show_bug.cgi?id=57438#c21.
With this `make check` passes with a homebrew installed gcc-5 and gcc-6.
Some bug (either in the red-black tree code, or in the pgi compiler) seems to
cause red-black trees to become unbalanced. This issue seems to go away if we
don't use compact red-black trees. Since red-black trees don't seem to be used
much anymore, I opted for what seems to be an easy fix here instead of digging
in and trying to find the root cause of the bug.
Some context in case it's helpful:
I experienced a ton of segfaults while using pgi as Chapel's target compiler
with jemalloc 4.0.4. The little bit of debugging I did pointed me somewhere
deep in red-black tree manipulation, but I didn't get a chance to investigate
further. It looks like 4.2.0 replaced most uses of red-black trees with
pairing-heaps, which seems to avoid whatever bug I was hitting.
However, `make check_unit` was still failing on the rb test, so I figured the
core issue was just being masked. Here's the `make check_unit` failure:
```sh
=== test/unit/rb ===
test_rb_empty: pass
tree_recurse:test/unit/rb.c:90: Failed assertion: (((_Bool) (((uintptr_t) (left_node)->link.rbn_right_red) & ((size_t)1)))) == (false) --> true != false: Node should be black
test_rb_random:test/unit/rb.c:274: Failed assertion: (imbalances) == (0) --> 1 != 0: Tree is unbalanced
tree_recurse:test/unit/rb.c:90: Failed assertion: (((_Bool) (((uintptr_t) (left_node)->link.rbn_right_red) & ((size_t)1)))) == (false) --> true != false: Node should be black
test_rb_random:test/unit/rb.c:274: Failed assertion: (imbalances) == (0) --> 1 != 0: Tree is unbalanced
node_remove:test/unit/rb.c:190: Failed assertion: (imbalances) == (0) --> 2 != 0: Tree is unbalanced
<jemalloc>: test/unit/rb.c:43: Failed assertion: "pathp[-1].cmp < 0"
test/test.sh: line 22: 12926 Aborted
Test harness error
```
While starting to debug I saw the RB_COMPACT option and decided to check if
turning that off resolved the bug. It seems to have fixed it (`make check_unit`
passes and the segfaults under Chapel are gone) so it seems like on okay
work-around. I'd imagine this has performance implications for red-black trees
under pgi, but if they're not going to be used much anymore it's probably not a
big deal.
Revert 245ae6036c (Support --with-lg-page
values larger than actual page size.), because it could cause VM map
fragmentation if the kernel grows mmap()ed memory downward.
This resolves#391.
rtree-based extent lookups remain more expensive than chunk-based run
lookups, but with this optimization the fast path slowdown is ~3 CPU
cycles per metadata lookup (on Intel Core i7-4980HQ), versus ~11 cycles
prior. The path caching speedup tends to degrade gracefully unless
allocated memory is spread far apart (as is the case when using a
mixture of sbrk() and mmap()).
In the case where prof_alloc_prep() is called with an over-estimate of
allocation size, and sampling doesn't end up being triggered, the tctx
must be discarded.
When an allocation is large enough to trigger multiple dumps, use
modular math rather than subtraction to reset the interval counter.
Prior to this change, it was possible for a single allocation to cause
many subsequent allocations to all trigger profile dumps.
When updating usable size for a sampled object, try to cancel out
the difference between LARGE_MINCLASS and usable size from the interval
counter.
